<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.3 20210610//EN" "JATS-journalpublishing1-3.dtd">
<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">mes</journal-id><journal-title-group><journal-title xml:lang="ru">Экстремальная биомедицина</journal-title><trans-title-group xml:lang="en"><trans-title>Extreme Medicine</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">3033-8964</issn><issn pub-type="epub">3033-8972</issn><publisher><publisher-name>Centre for Strategic Planning of the Federal Medical and Biological Agency</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.47183/mes.2021.003</article-id><article-id custom-type="elpub" pub-id-type="custom">mes-106</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>ОБЗОР</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>REVIEW</subject></subj-group></article-categories><title-group><article-title>Актуальные методы анализа изменений эпигенетического ландшафта организма, вызванных воздействием загрязнителей окружающей среды</article-title><trans-title-group xml:lang="en"><trans-title>Modern methods for analysis of changes to epigenetic landscape caused by exposure to environmental pollutants</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Заняткин</surname><given-names>И. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Zanyatkin</surname><given-names>I. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Иван Андреевич Заняткин</p><p>ул. Щукинская, д. 5, стр. 6, комн. 323, г. Москва, 123182</p></bio><bio xml:lang="en"><p>Ivan A. Zanyatkin </p><p>Shchukinskaya, 5, str. 6, k. 323, Moscow, 123182</p></bio><email xlink:type="simple">izanyatkin@cspmz.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Титова</surname><given-names>А. Г.</given-names></name><name name-style="western" xml:lang="en"><surname>Titova</surname><given-names>A. G.</given-names></name></name-alternatives><bio xml:lang="ru"><p>г. Москва</p></bio><bio xml:lang="en"><p>Moscow</p></bio><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Баёв</surname><given-names>A. B.</given-names></name><name name-style="western" xml:lang="en"><surname>Bayov</surname><given-names>A. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>г. Москва</p></bio><bio xml:lang="en"><p>Moscow</p></bio><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>Центр стратегического планирования и управления медико-биологическими рисками здоровью Федерального медико-биологического агентства</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Centre for Strategic Planning and Management of Biomedical Health Risks, Federal Medical Biological Agency</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2021</year></pub-date><pub-date pub-type="epub"><day>24</day><month>10</month><year>2024</year></pub-date><volume>23</volume><issue>1</issue><fpage>39</fpage><lpage>47</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Заняткин И.А., Титова А.Г., Баёв A.B., 2024</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="ru">Заняткин И.А., Титова А.Г., Баёв A.B.</copyright-holder><copyright-holder xml:lang="en">Zanyatkin I.A., Titova A.G., Bayov A.V.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://www.extrememedicine.ru/jour/article/view/106">https://www.extrememedicine.ru/jour/article/view/106</self-uri><abstract><p>Диагностика и лечение заболеваний, вызванных воздействием поллютантов на эпигеном человека, затруднены пластичностью и нестабильностью эпигенома, наличием нескольких путей регуляции транскрипции с нелинейной суммацией эффектов. Наиболее исследованные пути — метилирование ДНК, ацетилирование и метилирование гистонов. Доступны простые способы оценки уровня глобального метилирования ДНК, однако для определения механизмов воздействия загрязнителя на организм необходимо изучать эпигенетический ландшафт в деталях. Это заставляет ученых применять методы полногеномного секвенирования и обрабатывать огромные массивы результатов, что привело к появлению нескольких баз данных эпигенома человека и животных. Препараты для лечения эпигенетических нарушений сосредоточены на симптоматическом лечении и действуют на глобальное редактирование эпигенома или на регуляцию активности ферментов, играющих критическую роль в нарушении. Более перспективны методы селективного эпигеномного редактирования, основанные на абсолютно новых технологиях, находящихся на стадии лабораторных исследований. Представлен обзор современных возможностей науки в области диагностики и лечения заболеваний, вызванных воздействием поллютантов на эпигеном человека.</p></abstract><trans-abstract xml:lang="en"><p>The diagnosis and treatment of diseases caused by the exposure of human epigenome to environmental pollutants are hampered by epigenomic plasticity, instability and nonlinear cumulative effects of existing transcriptional regulatory pathways. DNA methylation, histone acetylation and histone methylation are the best studied epigenetic modifications. There are simple methods for assessing genome-wide DNA methylation; however, it is essential to study the epigenetic landscape in detail in order to uncover the mechanisms underlying pollutant-associated effects on the organism. This prompts researchers to employ whole-genome sequencing and analyze vast arrays of sequencing data that can be compiled into extensive databases of human and animal epigenomes. Drugs developed to counter epigenetic disorders neutralize their symptoms and either affect epigenetic modifications across the entire genome or regulate the activity of enzymes that play a critical role in such disorders. Promise is held by targeted genome editing methods supported by modern technologies that are undergoing preclinical trials. This review discusses the potential of modern science in the diagnosis and treatment of diseases caused by environmental pollutants.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>эпигенетические сигнатуры</kwd><kwd>метилирование</kwd><kwd>ацетилирование</kwd><kwd>токсическое воздействие</kwd><kwd>поллютант</kwd><kwd>хронические заболевания</kwd><kwd>секвенирование</kwd><kwd>редактирование генома</kwd></kwd-group><kwd-group xml:lang="en"><kwd>face transplant</kwd><kwd>microsurgery</kwd><kwd>facial flap</kwd><kwd>composite flap</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Hiragami-Hamada K, et al. The molecular basis for stability of heterochromatin-mediated silencing in mammals. Epigenetics Chromatin. 2009; 2 (1): 14.</mixed-citation><mixed-citation xml:lang="en">Hiragami-Hamada K, et al. The molecular basis for stability of heterochromatin-mediated silencing in mammals. Epigenetics Chromatin. 2009; 2 (1): 14.</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Bernstein E, et al. A phosphorylated subpopulation of the histone variant macroH2A1 is excluded from the inactive X chromosome and enriched during mitosis. Proc Natl Acad Sci USA. 2008 Feb 5; 105 (5): 1533–8.</mixed-citation><mixed-citation xml:lang="en">Bernstein E, et al. A phosphorylated subpopulation of the histone variant macroH2A1 is excluded from the inactive X chromosome and enriched during mitosis. Proc Natl Acad Sci USA. 2008 Feb 5; 105 (5): 1533–8.</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Hartley PD, Madhani HD. Mechanisms that Specify Promoter Nucleosome Location and Identity. Cell. 2009; 137 (3): 445–58.</mixed-citation><mixed-citation xml:lang="en">Hartley PD, Madhani HD. Mechanisms that Specify Promoter Nucleosome Location and Identity. Cell. 2009; 137 (3): 445–58.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Jing H, et al. Exchange of GATA Factors Mediates Transitions in Looped Chromatin Organization at a Developmentally Regulated Gene Locus. Molecular Cell. 2008; 29 (2): 232–42.</mixed-citation><mixed-citation xml:lang="en">Jing H, et al. Exchange of GATA Factors Mediates Transitions in Looped Chromatin Organization at a Developmentally Regulated Gene Locus. Molecular Cell. 2008; 29 (2): 232–42.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Klose RJ, Bird AP. Genomic DNA methylation: The mark and its mediators. Trends in Biochemical Sciences. 2006. DOI: 10.1016/J.TIBS.2005.12.008.</mixed-citation><mixed-citation xml:lang="en">Klose RJ, Bird AP. Genomic DNA methylation: The mark and its mediators. Trends in Biochemical Sciences. 2006. DOI: 10.1016/J.TIBS.2005.12.008.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Roy D, Yu K, Lieber MR. Mechanism of R-Loop Formation at Immunoglobulin Class Switch Sequences. Mol Cell Biol. 2008 Jan; 28 (1): 50–60.</mixed-citation><mixed-citation xml:lang="en">Roy D, Yu K, Lieber MR. Mechanism of R-Loop Formation at Immunoglobulin Class Switch Sequences. Mol Cell Biol. 2008 Jan; 28 (1): 50–60.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Beiter T, et al. Antisense transcription: A critical look in both directions. Cell Mol Life Sci. 2009 Jan; 66 (1): 94–112.</mixed-citation><mixed-citation xml:lang="en">Beiter T, et al. Antisense transcription: A critical look in both directions. Cell Mol Life Sci. 2009 Jan; 66 (1): 94–112.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Gore AC, et al. EDC-2: The Endocrine Society’s Second Scientific Statement on Endocrine-Disrupting Chemicals. Endocrine Reviews. Endocrine Society. 2015; 36 (6): 1–150.</mixed-citation><mixed-citation xml:lang="en">Gore AC, et al. EDC-2: The Endocrine Society’s Second Scientific Statement on Endocrine-Disrupting Chemicals. Endocrine Reviews. Endocrine Society. 2015; 36 (6): 1–150.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Subramaniam D, et al. DNA Methyltransferases: A Novel Target for Prevention and Therapy. Front Oncol. 2014; 4: 80.</mixed-citation><mixed-citation xml:lang="en">Subramaniam D, et al. DNA Methyltransferases: A Novel Target for Prevention and Therapy. Front Oncol. 2014; 4: 80.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Kohli RM, Zhang Y. TET enzymes, TDG and the dynamics of DNA demethylation. Nature, 2013; 502 (7472): 472–79.</mixed-citation><mixed-citation xml:lang="en">Kohli RM, Zhang Y. TET enzymes, TDG and the dynamics of DNA demethylation. Nature, 2013; 502 (7472): 472–79.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Gillette TG, Hill JA. Readers, writers, and erasers: Chromatin as the whiteboard of heart disease. Circulation Research. 2015; 116 (7): 1245–53.</mixed-citation><mixed-citation xml:lang="en">Gillette TG, Hill JA. Readers, writers, and erasers: Chromatin as the whiteboard of heart disease. Circulation Research. 2015; 116 (7): 1245–53.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Софронов Г. А., Паткин Е. Л. Эпигенетическая токсикология: перспективы развития. Токсикологический вестник. 2018; 0 (1): 2–7.</mixed-citation><mixed-citation xml:lang="en">Sofronov GA, Patkin EL. Jepigeneticheskaja toksikologija: perspektivy razvitija. Toksikologicheskij vestnik. 2018; 0 (1): 2–7. Russian.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">Anglim PP, et al. Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer. Mol Cancer. 2008; 7: 62.</mixed-citation><mixed-citation xml:lang="en">Anglim PP, et al. Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer. Mol Cancer. 2008; 7: 62.</mixed-citation></citation-alternatives></ref><ref id="cit14"><label>14</label><citation-alternatives><mixed-citation xml:lang="ru">Hooven LA, Baird WM. Proteomic analysis of MCF-7 cells treated with benzo[a]pyrene, dibenzo[a,l]pyrene, coal tar extract, and diesel exhaust extract. Toxicology. 2008; 249 (1): 1–10.</mixed-citation><mixed-citation xml:lang="en">Hooven LA, Baird WM. Proteomic analysis of MCF-7 cells treated with benzo[a]pyrene, dibenzo[a,l]pyrene, coal tar extract, and diesel exhaust extract. Toxicology. 2008; 249 (1): 1–10.</mixed-citation></citation-alternatives></ref><ref id="cit15"><label>15</label><citation-alternatives><mixed-citation xml:lang="ru">Méplan C, Mann K, Hainaut P. Cadmium induces conformational modifications of wild-type p53 and suppresses p53 response to DNA damage in cultured cells. J Biol Chem. 1999; 274 (44): 31663–70.</mixed-citation><mixed-citation xml:lang="en">Méplan C, Mann K, Hainaut P. Cadmium induces conformational modifications of wild-type p53 and suppresses p53 response to DNA damage in cultured cells. J Biol Chem. 1999; 274 (44): 31663–70.</mixed-citation></citation-alternatives></ref><ref id="cit16"><label>16</label><citation-alternatives><mixed-citation xml:lang="ru">Thompson RF, et al. Experimental intrauterine growth restriction induces alterations in DNA methylation and gene expression in pancreatic islets of rats. J Biol Chem. 2010; 285 (20): 15111–8.</mixed-citation><mixed-citation xml:lang="en">Thompson RF, et al. Experimental intrauterine growth restriction induces alterations in DNA methylation and gene expression in pancreatic islets of rats. J Biol Chem. 2010; 285 (20): 15111–8.</mixed-citation></citation-alternatives></ref><ref id="cit17"><label>17</label><citation-alternatives><mixed-citation xml:lang="ru">Lister R, et al. Human DNA methylomes at base resolution show widespread epigenomic differences. Nature. 2009; 462 (7271): 315–22.</mixed-citation><mixed-citation xml:lang="en">Lister R, et al. Human DNA methylomes at base resolution show widespread epigenomic differences. Nature. 2009; 462 (7271): 315–22.</mixed-citation></citation-alternatives></ref><ref id="cit18"><label>18</label><citation-alternatives><mixed-citation xml:lang="ru">Meissner A, et al. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature, 2008; 454 (7205): 766–70.</mixed-citation><mixed-citation xml:lang="en">Meissner A, et al. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature, 2008; 454 (7205): 766–70.</mixed-citation></citation-alternatives></ref><ref id="cit19"><label>19</label><citation-alternatives><mixed-citation xml:lang="ru">Suzuki M, et al. Optimized design and data analysis of tag-based cytosine methylation assays. Genome Biol. 2010; 1 (4): R36.</mixed-citation><mixed-citation xml:lang="en">Suzuki M, et al. Optimized design and data analysis of tag-based cytosine methylation assays. Genome Biol. 2010; 1 (4): R36.</mixed-citation></citation-alternatives></ref><ref id="cit20"><label>20</label><citation-alternatives><mixed-citation xml:lang="ru">Ball MP et, al. Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells. Nat Biotechnol. 2009; 27 (4): 361–8.</mixed-citation><mixed-citation xml:lang="en">Ball MP et, al. Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells. Nat Biotechnol. 2009; 27 (4): 361–8.</mixed-citation></citation-alternatives></ref><ref id="cit21"><label>21</label><citation-alternatives><mixed-citation xml:lang="ru">Down TA, et al. A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis. Nat Biotechnol. 2008; 26 (7): 779–85.</mixed-citation><mixed-citation xml:lang="en">Down TA, et al. A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis. Nat Biotechnol. 2008; 26 (7): 779–85.</mixed-citation></citation-alternatives></ref><ref id="cit22"><label>22</label><citation-alternatives><mixed-citation xml:lang="ru">Bibikova M, et al. High density DNA methylation array with single CpG site resolution. Genomics. 2011; 98 (4): 288–95.</mixed-citation><mixed-citation xml:lang="en">Bibikova M, et al. High density DNA methylation array with single CpG site resolution. Genomics. 2011; 98 (4): 288–95.</mixed-citation></citation-alternatives></ref><ref id="cit23"><label>23</label><citation-alternatives><mixed-citation xml:lang="ru">Nagalakshmi U, et al. The transcriptional landscape of the yeast genome defined by RNA sequencing. Science. 2008; 320 (5881): 1344–9.</mixed-citation><mixed-citation xml:lang="en">Nagalakshmi U, et al. The transcriptional landscape of the yeast genome defined by RNA sequencing. Science. 2008; 320 (5881): 1344–9.</mixed-citation></citation-alternatives></ref><ref id="cit24"><label>24</label><citation-alternatives><mixed-citation xml:lang="ru">Mikkelsen TS, et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature. 2007; 448 (7153): 553–60.</mixed-citation><mixed-citation xml:lang="en">Mikkelsen TS, et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature. 2007; 448 (7153): 553–60.</mixed-citation></citation-alternatives></ref><ref id="cit25"><label>25</label><citation-alternatives><mixed-citation xml:lang="ru">Song L, Crawford GE. DNase-seq: A high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells. Cold Spring Harb Protoc. 2010; 5 (2): pdb. prot5384.</mixed-citation><mixed-citation xml:lang="en">Song L, Crawford GE. DNase-seq: A high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells. Cold Spring Harb Protoc. 2010; 5 (2): pdb. prot5384.</mixed-citation></citation-alternatives></ref><ref id="cit26"><label>26</label><citation-alternatives><mixed-citation xml:lang="ru">Fakhrai-Rad H, Pourmand N, Ronaghi M. PyrosequencingTM: An accurate detection platform for single nucleotide polymorphisms. Human Mutation. 2002; 19 (5): 479–85.</mixed-citation><mixed-citation xml:lang="en">Fakhrai-Rad H, Pourmand N, Ronaghi M. PyrosequencingTM: An accurate detection platform for single nucleotide polymorphisms. Human Mutation. 2002; 19 (5): 479–85.</mixed-citation></citation-alternatives></ref><ref id="cit27"><label>27</label><citation-alternatives><mixed-citation xml:lang="ru">De Bustos C, et al. Tissue-specific variation in DNA methylation levels along human chromosome 1. Epigenetics Chromatin. 2009; 2 (1): 7.</mixed-citation><mixed-citation xml:lang="en">De Bustos C, et al. Tissue-specific variation in DNA methylation levels along human chromosome 1. Epigenetics Chromatin. 2009; 2 (1): 7.</mixed-citation></citation-alternatives></ref><ref id="cit28"><label>28</label><citation-alternatives><mixed-citation xml:lang="ru">Christensen BC, et al. Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CPG island context. PLoS Genet. 2009; 5 (8): e1000602.</mixed-citation><mixed-citation xml:lang="en">Christensen BC, et al. Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CPG island context. PLoS Genet. 2009; 5 (8): e1000602.</mixed-citation></citation-alternatives></ref><ref id="cit29"><label>29</label><citation-alternatives><mixed-citation xml:lang="ru">Ma X, Chen J, Tian Y. Pregnane X receptor as the sensor and effector in regulating epigenome. J Cell Physiol. 2015; 230 (4): 752–7.</mixed-citation><mixed-citation xml:lang="en">Ma X, Chen J, Tian Y. Pregnane X receptor as the sensor and effector in regulating epigenome. J Cell Physiol. 2015; 230 (4): 752–7.</mixed-citation></citation-alternatives></ref><ref id="cit30"><label>30</label><citation-alternatives><mixed-citation xml:lang="ru">Peters AH, et al. Histone H3 lysine 9 methylation is an epigenetic imprint of facultative heterochromatin. Nat Genet. 2002; 30 (1): 77–80.</mixed-citation><mixed-citation xml:lang="en">Peters AH, et al. Histone H3 lysine 9 methylation is an epigenetic imprint of facultative heterochromatin. Nat Genet. 2002; 30 (1): 77–80.</mixed-citation></citation-alternatives></ref><ref id="cit31"><label>31</label><citation-alternatives><mixed-citation xml:lang="ru">Vakoc CR, et al. Histone H3 lysine 9 methylation and HP1γ are associated with transcription elongation through mammalian chromatin. Mol Cell. 2005; 19 (3): 381–91.</mixed-citation><mixed-citation xml:lang="en">Vakoc CR, et al. Histone H3 lysine 9 methylation and HP1γ are associated with transcription elongation through mammalian chromatin. Mol Cell. 2005; 19 (3): 381–91.</mixed-citation></citation-alternatives></ref><ref id="cit32"><label>32</label><citation-alternatives><mixed-citation xml:lang="ru">Tilgner H. et al. Nucleosome positioning as a determinant of exon recognition. Nat Struct Mol Biol. 2009; 16 (9): 996–1001.</mixed-citation><mixed-citation xml:lang="en">Tilgner H. et al. Nucleosome positioning as a determinant of exon recognition. Nat Struct Mol Biol. 2009; 16 (9): 996–1001.</mixed-citation></citation-alternatives></ref><ref id="cit33"><label>33</label><citation-alternatives><mixed-citation xml:lang="ru">Laurent L, et al. Dynamic changes in the human methylome during differentiation. Genome Res. 2010; 20 (3): 320–31.</mixed-citation><mixed-citation xml:lang="en">Laurent L, et al. Dynamic changes in the human methylome during differentiation. Genome Res. 2010; 20 (3): 320–31.</mixed-citation></citation-alternatives></ref><ref id="cit34"><label>34</label><citation-alternatives><mixed-citation xml:lang="ru">Hou Lifang, et al. Environmental Chemical Exposures and Human Epigenetics. Int J Epidemiol. 2012; 41 (1): 79–105.</mixed-citation><mixed-citation xml:lang="en">Hou Lifang, et al. Environmental Chemical Exposures and Human Epigenetics. Int J Epidemiol. 2012; 41 (1): 79–105.</mixed-citation></citation-alternatives></ref><ref id="cit35"><label>35</label><citation-alternatives><mixed-citation xml:lang="ru">Simmons R. Perinatal Programming of Obesity. Semin Perinatol. 2008; 32 (5): 371–4.</mixed-citation><mixed-citation xml:lang="en">Simmons R. Perinatal Programming of Obesity. Semin Perinatol. 2008; 32 (5): 371–4.</mixed-citation></citation-alternatives></ref><ref id="cit36"><label>36</label><citation-alternatives><mixed-citation xml:lang="ru">Gluckman PD, Hanson MA. Living with the past: Evolution, development, and patterns of disease. Science. 2004; 305 (691): 1733–6.</mixed-citation><mixed-citation xml:lang="en">Gluckman PD, Hanson MA. Living with the past: Evolution, development, and patterns of disease. Science. 2004; 305 (691): 1733–6.</mixed-citation></citation-alternatives></ref><ref id="cit37"><label>37</label><citation-alternatives><mixed-citation xml:lang="ru">Derghal A, et al. An emerging role of micro-RNA in the effect of the endocrine disruptors. Front Neurosci. 2016; 10: 318.</mixed-citation><mixed-citation xml:lang="en">Derghal A, et al. An emerging role of micro-RNA in the effect of the endocrine disruptors. Front Neurosci. 2016; 10: 318.</mixed-citation></citation-alternatives></ref><ref id="cit38"><label>38</label><citation-alternatives><mixed-citation xml:lang="ru">Doherty LF, et al. In utero exposure to diethylstilbestrol (DES) or bisphenol-A (BPA) increases EZH2 expression in the mammary gland: An epigenetic mechanism linking endocrine disruptors to breast cancer. Horm Cancer. 2010; 1 (3): 146–55.</mixed-citation><mixed-citation xml:lang="en">Doherty LF, et al. In utero exposure to diethylstilbestrol (DES) or bisphenol-A (BPA) increases EZH2 expression in the mammary gland: An epigenetic mechanism linking endocrine disruptors to breast cancer. Horm Cancer. 2010; 1 (3): 146–55.</mixed-citation></citation-alternatives></ref><ref id="cit39"><label>39</label><citation-alternatives><mixed-citation xml:lang="ru">Ernst J, Kellis M. Discovery and characterization of chromatin states for systematic annotation of the human genome. Nat Biotechnol. 2010; 28 (8): 817–25.</mixed-citation><mixed-citation xml:lang="en">Ernst J, Kellis M. Discovery and characterization of chromatin states for systematic annotation of the human genome. Nat Biotechnol. 2010; 28 (8): 817–25.</mixed-citation></citation-alternatives></ref><ref id="cit40"><label>40</label><citation-alternatives><mixed-citation xml:lang="ru">LeBaron MJ, et al. Epigenetics and chemical safety assessment. Mutat Res. 2010; 705 (2): 83–95.</mixed-citation><mixed-citation xml:lang="en">LeBaron MJ, et al. Epigenetics and chemical safety assessment. Mutat Res. 2010; 705 (2): 83–95.</mixed-citation></citation-alternatives></ref><ref id="cit41"><label>41</label><citation-alternatives><mixed-citation xml:lang="ru">Jay IG, et al. What Do We Need to Know Prior to Thinking About Incorporating an Epigenetic Evaluation Into Safety Assessments? Toxicol Sci. 2010; 116 (2): 375–81.</mixed-citation><mixed-citation xml:lang="en">Jay IG, et al. What Do We Need to Know Prior to Thinking About Incorporating an Epigenetic Evaluation Into Safety Assessments? Toxicol Sci. 2010; 116 (2): 375–81.</mixed-citation></citation-alternatives></ref><ref id="cit42"><label>42</label><citation-alternatives><mixed-citation xml:lang="ru">Wild L, et al. In vitro transformation of mesenchymal stem cells induces gradual genomic hypomethylation. Carcinogenesis. 2010; 31(10): 1854–62.</mixed-citation><mixed-citation xml:lang="en">Wild L, et al. In vitro transformation of mesenchymal stem cells induces gradual genomic hypomethylation. Carcinogenesis. 2010; 31(10): 1854–62.</mixed-citation></citation-alternatives></ref><ref id="cit43"><label>43</label><citation-alternatives><mixed-citation xml:lang="ru">He Y, et al. Spatiotemporal DNA methylome dynamics of the developing mouse fetus: 7818. Nature. 2020; 583 (7818): 752–9.</mixed-citation><mixed-citation xml:lang="en">He Y, et al. Spatiotemporal DNA methylome dynamics of the developing mouse fetus: 7818. Nature. 2020; 583 (7818): 752–9.</mixed-citation></citation-alternatives></ref><ref id="cit44"><label>44</label><citation-alternatives><mixed-citation xml:lang="ru">Anway M, Cupp A, Uzumcu M. Epigenetic Transgenerational Actions of Endocrine Disruptors and Male Fertility. Science. 2005; 308 (5727): 1466–9.</mixed-citation><mixed-citation xml:lang="en">Anway M, Cupp A, Uzumcu M. Epigenetic Transgenerational Actions of Endocrine Disruptors and Male Fertility. Science. 2005; 308 (5727): 1466–9.</mixed-citation></citation-alternatives></ref><ref id="cit45"><label>45</label><citation-alternatives><mixed-citation xml:lang="ru">Anway MD, Skinner MK. Epigenetic transgenerational actions of endocrine disruptors. Endocrinology. 2006; 147 (6 Suppl): S43–9.</mixed-citation><mixed-citation xml:lang="en">Anway MD, Skinner MK. Epigenetic transgenerational actions of endocrine disruptors. Endocrinology. 2006; 147 (6 Suppl): S43–9.</mixed-citation></citation-alternatives></ref><ref id="cit46"><label>46</label><citation-alternatives><mixed-citation xml:lang="ru">Crews D, et al. Transgenerational epigenetic imprints on mate preference. Proc Natl Acad Sci USA. 2007; 104 (14): 5942–6.</mixed-citation><mixed-citation xml:lang="en">Crews D, et al. Transgenerational epigenetic imprints on mate preference. Proc Natl Acad Sci USA. 2007; 104 (14): 5942–6.</mixed-citation></citation-alternatives></ref><ref id="cit47"><label>47</label><citation-alternatives><mixed-citation xml:lang="ru">Guerrero-Bosagna CM, Skinner MK. Epigenetic transgenerational effects of endocrine disruptors on male reproduction. Semin Reprod Med. 2009; 27 (5): 403–8.</mixed-citation><mixed-citation xml:lang="en">Guerrero-Bosagna CM, Skinner MK. Epigenetic transgenerational effects of endocrine disruptors on male reproduction. Semin Reprod Med. 2009; 27 (5): 403–8.</mixed-citation></citation-alternatives></ref><ref id="cit48"><label>48</label><citation-alternatives><mixed-citation xml:lang="ru">Dolinoy DC, Huang D, Jirtle RL. Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development. Proc Natl Acad Sci USA. 2007; 104 (32): 13056–61.</mixed-citation><mixed-citation xml:lang="en">Dolinoy DC, Huang D, Jirtle RL. Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development. Proc Natl Acad Sci USA. 2007; 104 (32): 13056–61.</mixed-citation></citation-alternatives></ref><ref id="cit49"><label>49</label><citation-alternatives><mixed-citation xml:lang="ru">Rosenfeld CS, et al. Maternal exposure to bisphenol A and genistein has minimal effect on A vy/a offspring coat color but favors birth of agouti over nonagouti mice. Proc Natl Acad Sci USA. 2013: 110 (2): 537–42.</mixed-citation><mixed-citation xml:lang="en">Rosenfeld CS, et al. Maternal exposure to bisphenol A and genistein has minimal effect on A vy/a offspring coat color but favors birth of agouti over nonagouti mice. Proc Natl Acad Sci USA. 2013: 110 (2): 537–42.</mixed-citation></citation-alternatives></ref><ref id="cit50"><label>50</label><citation-alternatives><mixed-citation xml:lang="ru">Udvadia AJ, Linney E. Windows into development: Historic, current, and future perspectives on transgenic zebrafish. Dev Biol. 2003; 256 (1): 1–17.</mixed-citation><mixed-citation xml:lang="en">Udvadia AJ, Linney E. Windows into development: Historic, current, and future perspectives on transgenic zebrafish. Dev Biol. 2003; 256 (1): 1–17.</mixed-citation></citation-alternatives></ref><ref id="cit51"><label>51</label><citation-alternatives><mixed-citation xml:lang="ru">Krauss V, Reuter G. DNA Methylation in drosophila-a critical evaluation. Prog Mol Biol Transl Sci. 2011; 101: 177–91.</mixed-citation><mixed-citation xml:lang="en">Krauss V, Reuter G. DNA Methylation in drosophila-a critical evaluation. Prog Mol Biol Transl Sci. 2011; 101: 177–91.</mixed-citation></citation-alternatives></ref><ref id="cit52"><label>52</label><citation-alternatives><mixed-citation xml:lang="ru">Se K, et al. Sperm Epimutation Biomarkers of Obesity and Pathologies Following DDT Induced Epigenetic Transgenerational Inheritance of Disease. Environ Epigenet. 2019; 5 (2): dvz008</mixed-citation><mixed-citation xml:lang="en">Se K, et al. Sperm Epimutation Biomarkers of Obesity and Pathologies Following DDT Induced Epigenetic Transgenerational Inheritance of Disease. Environ Epigenet. 2019; 5 (2): dvz008</mixed-citation></citation-alternatives></ref><ref id="cit53"><label>53</label><citation-alternatives><mixed-citation xml:lang="ru">Скрябин Н. А. и др. Методы исследования метилирования ДНК: возможности и перспективы использования в онкологии. Сибирский Онкологический Журнал. 2013; 6.</mixed-citation><mixed-citation xml:lang="en">Skrjabin NA, i dr. Metody issledovanija metilirovanija DNK: vozmozhnosti i perspektivy ispol'zovanija v onkologii. Sibirskij Onkologicheskij Zhurnal. 2013; 6. Russian.</mixed-citation></citation-alternatives></ref><ref id="cit54"><label>54</label><citation-alternatives><mixed-citation xml:lang="ru">Pandey M, Shukla S, Gupta S. Promoter demethylation and chromatin remodeling by green tea polyphenols leads to re- expression of GSTP1 in human prostate cancer cells. Int J Cancer. 2010; 126 (11): 2520–33.</mixed-citation><mixed-citation xml:lang="en">Pandey M, Shukla S, Gupta S. Promoter demethylation and chromatin remodeling by green tea polyphenols leads to re- expression of GSTP1 in human prostate cancer cells. Int J Cancer. 2010; 126 (11): 2520–33.</mixed-citation></citation-alternatives></ref><ref id="cit55"><label>55</label><citation-alternatives><mixed-citation xml:lang="ru">Fang M, Chen D, Yang CS. Dietary Polyphenols May Affect DNA Methylation. J Nutr. 2007; 137 (1 Suppl): 223S–228S.</mixed-citation><mixed-citation xml:lang="en">Fang M, Chen D, Yang CS. Dietary Polyphenols May Affect DNA Methylation. J Nutr. 2007; 137 (1 Suppl): 223S–228S.</mixed-citation></citation-alternatives></ref><ref id="cit56"><label>56</label><citation-alternatives><mixed-citation xml:lang="ru">Won JL, Shim JY, Zhu BT. Mechanisms for the inhibition of DNA methyltransferases by tea catechins and bioflavonoids. Mol Pharmacol. 2005; 68 (4): 1018–30.</mixed-citation><mixed-citation xml:lang="en">Won JL, Shim JY, Zhu BT. Mechanisms for the inhibition of DNA methyltransferases by tea catechins and bioflavonoids. Mol Pharmacol. 2005; 68 (4): 1018–30.</mixed-citation></citation-alternatives></ref><ref id="cit57"><label>57</label><citation-alternatives><mixed-citation xml:lang="ru">Gao Z, et al. Promoter demethylation of WIF-1 by epigallocatechin- 3-gallate in lung cancer cells. Anticancer Res. 2009; 29 (6): 2025–30.</mixed-citation><mixed-citation xml:lang="en">Gao Z, et al. Promoter demethylation of WIF-1 by epigallocatechin- 3-gallate in lung cancer cells. Anticancer Res. 2009; 29 (6): 2025–30.</mixed-citation></citation-alternatives></ref><ref id="cit58"><label>58</label><citation-alternatives><mixed-citation xml:lang="ru">FDA Approval Summary: Vorinostat for Treatment of Advanced Primary Cutaneous T-Cell Lymphoma. Oncologist. 2007; 12 (10): 1247–52.</mixed-citation><mixed-citation xml:lang="en">FDA Approval Summary: Vorinostat for Treatment of Advanced Primary Cutaneous T-Cell Lymphoma. Oncologist. 2007; 12 (10): 1247–52.</mixed-citation></citation-alternatives></ref><ref id="cit59"><label>59</label><citation-alternatives><mixed-citation xml:lang="ru">Bubna AK. Vorinostat — An Overview. Indian J Dermatol. 2015; 60 (4): 419.</mixed-citation><mixed-citation xml:lang="en">Bubna AK. Vorinostat — An Overview. Indian J Dermatol. 2015; 60 (4): 419.</mixed-citation></citation-alternatives></ref><ref id="cit60"><label>60</label><citation-alternatives><mixed-citation xml:lang="ru">Beaver LM, et al. 3,3’-Diindolylmethane, but not indole-3- carbinol, inhibits histone deacetylase activity in prostate cancer cells. Toxicol Appl Pharmacol. 2012; 263 (3): 345–51.</mixed-citation><mixed-citation xml:lang="en">Beaver LM, et al. 3,3’-Diindolylmethane, but not indole-3- carbinol, inhibits histone deacetylase activity in prostate cancer cells. Toxicol Appl Pharmacol. 2012; 263 (3): 345–51.</mixed-citation></citation-alternatives></ref><ref id="cit61"><label>61</label><citation-alternatives><mixed-citation xml:lang="ru">Goon P, Sonnex C, Jani P, et al. Recurrent respiratory papillomatosis: an overview of current thinking and treatment. Eur Arch Otorhinolaryngol. 2008; 265: 147–51.</mixed-citation><mixed-citation xml:lang="en">Goon P, Sonnex C, Jani P, et al. Recurrent respiratory papillomatosis: an overview of current thinking and treatment. Eur Arch Otorhinolaryngol. 2008; 265: 147–51.</mixed-citation></citation-alternatives></ref><ref id="cit62"><label>62</label><citation-alternatives><mixed-citation xml:lang="ru">Rajendran P, et al. Dietary phytochemicals, HDAC inhibition, and DNA damage/repair defects in cancer cells. Clin Epigenetic. 2011; 3 (1): 4.</mixed-citation><mixed-citation xml:lang="en">Rajendran P, et al. Dietary phytochemicals, HDAC inhibition, and DNA damage/repair defects in cancer cells. Clin Epigenetic. 2011; 3 (1): 4.</mixed-citation></citation-alternatives></ref><ref id="cit63"><label>63</label><citation-alternatives><mixed-citation xml:lang="ru">Zhang WW, Feng Z, Narod SA. Multiple therapeutic and preventive effects of 3,3′-diindolylmethane on cancers including prostate cancer and high grade prostatic intraepithelial neoplasia. J Biomed Res. 2014; 28 (5): 339–48.</mixed-citation><mixed-citation xml:lang="en">Zhang WW, Feng Z, Narod SA. Multiple therapeutic and preventive effects of 3,3′-diindolylmethane on cancers including prostate cancer and high grade prostatic intraepithelial neoplasia. J Biomed Res. 2014; 28 (5): 339–48.</mixed-citation></citation-alternatives></ref><ref id="cit64"><label>64</label><citation-alternatives><mixed-citation xml:lang="ru">Fan S, et al. DIM (3,3'-diindolylmethane) confers protection against ionizing radiation by a unique mechanism. Proc Natl Acad Sci USA. 2013; 110 (46): 18650–5.</mixed-citation><mixed-citation xml:lang="en">Fan S, et al. DIM (3,3'-diindolylmethane) confers protection against ionizing radiation by a unique mechanism. Proc Natl Acad Sci USA. 2013; 110 (46): 18650–5.</mixed-citation></citation-alternatives></ref><ref id="cit65"><label>65</label><citation-alternatives><mixed-citation xml:lang="ru">Lyn-Cook BD, Mohammed SI, et al. Gender differences in gemcitabine (Gemzar) efficacy in cancer cells: effect of indole-3- carbinol. Anticancer Res. 2010; 30 (12): 4907–13.</mixed-citation><mixed-citation xml:lang="en">Lyn-Cook BD, Mohammed SI, et al. Gender differences in gemcitabine (Gemzar) efficacy in cancer cells: effect of indole-3- carbinol. Anticancer Res. 2010; 30 (12): 4907–13.</mixed-citation></citation-alternatives></ref><ref id="cit66"><label>66</label><citation-alternatives><mixed-citation xml:lang="ru">Auborn KJ, et al. Lifespan Is Prolonged in Autoimmune-Prone (NZB/NZW) F1 Mice Fed a Diet Supplemented with Indole-3- Carbinol. J Nutr Oxford Academic. 2003; 133 (11): 3610–3.</mixed-citation><mixed-citation xml:lang="en">Auborn KJ, et al. Lifespan Is Prolonged in Autoimmune-Prone (NZB/NZW) F1 Mice Fed a Diet Supplemented with Indole-3- Carbinol. J Nutr Oxford Academic. 2003; 133 (11): 3610–3.</mixed-citation></citation-alternatives></ref><ref id="cit67"><label>67</label><citation-alternatives><mixed-citation xml:lang="ru">Italiano A, et al. Tazemetostat, an EZH2 inhibitor, in relapsed or refractory B-cell non-Hodgkin lymphoma and advanced solid tumours: a first-in-human, open-label, phase 1 study. Lancet Oncol. 2018; 19 (5): 649–59.</mixed-citation><mixed-citation xml:lang="en">Italiano A, et al. Tazemetostat, an EZH2 inhibitor, in relapsed or refractory B-cell non-Hodgkin lymphoma and advanced solid tumours: a first-in-human, open-label, phase 1 study. Lancet Oncol. 2018; 19 (5): 649–59.</mixed-citation></citation-alternatives></ref><ref id="cit68"><label>68</label><citation-alternatives><mixed-citation xml:lang="ru">Campbell CT, et al. Mechanisms of Pinometostat (EPZ-5676) Treatment–Emergent Resistance in MLL-Rearranged Leukemia. Mol Cancer Ther. 2017; 16 (8): 1669–79.</mixed-citation><mixed-citation xml:lang="en">Campbell CT, et al. Mechanisms of Pinometostat (EPZ-5676) Treatment–Emergent Resistance in MLL-Rearranged Leukemia. Mol Cancer Ther. 2017; 16 (8): 1669–79.</mixed-citation></citation-alternatives></ref><ref id="cit69"><label>69</label><citation-alternatives><mixed-citation xml:lang="ru">Siu LL, Rasco DW, Vinay SP, et al. METEOR-1: a phase I study of GSK3326595, a first-in-class protein arginine methyltransferase 5 (PRMT5) inhibitor, in advanced solid tumours. Ann Oncol. 2019; 30 (Suppl 5): v159–v193.</mixed-citation><mixed-citation xml:lang="en">Siu LL, Rasco DW, Vinay SP, et al. METEOR-1: a phase I study of GSK3326595, a first-in-class protein arginine methyltransferase 5 (PRMT5) inhibitor, in advanced solid tumours. Ann Oncol. 2019; 30 (Suppl 5): v159–v193.</mixed-citation></citation-alternatives></ref><ref id="cit70"><label>70</label><citation-alternatives><mixed-citation xml:lang="ru">Claus R, Lübbert M. Epigenetic targets in hematopoietic malignancies. Oncogene. 2003; 22 (42): 6489–96.</mixed-citation><mixed-citation xml:lang="en">Claus R, Lübbert M. Epigenetic targets in hematopoietic malignancies. Oncogene. 2003; 22 (42): 6489–96.</mixed-citation></citation-alternatives></ref><ref id="cit71"><label>71</label><citation-alternatives><mixed-citation xml:lang="ru">Pogribny IP, Tryndyak VP, Boureiko A, Melnyk S, Bagnyukova TV, Montgomery B, et al. Mechanisms of peroxisome proliferator- induced DNA hypomethylation in rat liver. Mutat Res. 2008; 644 (1–2): 17–23.</mixed-citation><mixed-citation xml:lang="en">Pogribny IP, Tryndyak VP, Boureiko A, Melnyk S, Bagnyukova TV, Montgomery B, et al. Mechanisms of peroxisome proliferator-induced DNA hypomethylation in rat liver. Mutat Res. 2008; 644 (1–2): 17–23.</mixed-citation></citation-alternatives></ref><ref id="cit72"><label>72</label><citation-alternatives><mixed-citation xml:lang="ru">Niculescu MD, Zeisel SH. Diet, methyl donors and DNA methylation: interactions between dietary folate, methionine and choline. J Nutr. 2002; 132 (8 Suppl): 2333S–5S.</mixed-citation><mixed-citation xml:lang="en">Niculescu MD, Zeisel SH. Diet, methyl donors and DNA methylation: interactions between dietary folate, methionine and choline. J Nutr. 2002; 132 (8 Suppl): 2333S–5S.</mixed-citation></citation-alternatives></ref><ref id="cit73"><label>73</label><citation-alternatives><mixed-citation xml:lang="ru">Verma S, et al. Computational approaches in epitope design using DNA binding proteins as vaccine candidate in Mycobacterium tuberculosis. Infect Genet Evol. 2020; 83: 1348–1567.</mixed-citation><mixed-citation xml:lang="en">Verma S, et al. Computational approaches in epitope design using DNA binding proteins as vaccine candidate in Mycobacterium tuberculosis. Infect Genet Evol. 2020; 83: 1348–1567.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
